EnhancerDB
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  3. rs548461020[chr17:77899364]
Enhancers that have rs548461020[chr17:77899364]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs548461020[chr17:77899364]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77898350 77900343 TCF7L2 GTRD no Colon (HCT116) 21796705
chr17 77898587 77900114 TCF7L2 GTRD no Colon (HCT116) 21796706
chr17 77898739 77899407 TCF7L2 GTRD no Colon (HCT116) 21796709
chr17 77898959 77899423 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21796711
chr17 77898965 77899421 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21796712
chr17 77898979 77899375 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21796713
chr17 77899034 77899564 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21796715
chr17 77899042 77899558 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21796716
chr17 77899187 77899451 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21796721
chr17 77899356 77899375 REST JASPAR yes 56229679
chr17 77899359 77899370 EBF1 JASPAR yes 56229680
Genes associated with rs548461020[chr17:77899364], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More