EnhancerDB
  1. Home
  2. SNP
  3. rs548502092[chr6:16478342]
Enhancers that have rs548502092[chr6:16478342]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16469585 16486035 enh38830
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Blood (T-cell) Esophagus Astrocyte Blood (GM12878) Stomach Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Thymus Heart
Transcript factors that have rs548502092[chr6:16478342]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16478341 16478356 SOX21 JASPAR yes 100305722
chr6 16478342 16478346 H1TF2 TRANSFAC yes 100305723
chr6 16478342 16478346 NFE TRANSFAC yes 100305724
chr6 16478342 16478346 SRF TRANSFAC yes 100305725
Genes associated with rs548502092[chr6:16478342], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More