EnhancerDB
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  3. rs548524324[chr1:235566109]
Enhancers that have rs548524324[chr1:235566109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235558909 235574575 enh12802
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas (Panc1)
Transcript factors that have rs548524324[chr1:235566109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235566106 235566127 IRF1 JASPAR yes 36367187
chr1 235566108 235566114 TBP TRANSFAC yes 36367188
chr1 235566108 235566119 FOXC1 JASPAR yes 36367189
chr1 235566108 235566120 FOXC2 JASPAR yes 36367190
chr1 235566109 235566123 IRF7 JASPAR yes 36367191
Genes associated with rs548524324[chr1:235566109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More