EnhancerDB
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  3. rs548530959[chr1:204555617]
Enhancers that have rs548530959[chr1:204555617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204551125 204563635 enh889
Prostate (PC-3) Brain (SK-N-MC) Astrocyte Blood (OCI-LY7) Stomach Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs548530959[chr1:204555617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204555597 204555618 IRF1 JASPAR yes 34713426
chr1 204555599 204555620 IRF1 JASPAR yes 34713427
chr1 204555601 204555622 IRF1 JASPAR yes 34713428
chr1 204555602 204555617 FOXP1 JASPAR yes 34713429
chr1 204555602 204555623 IRF1 JASPAR yes 34713430
chr1 204555603 204555618 STAT2 JASPAR yes 34713431
chr1 204555604 204555619 FOXP1 JASPAR yes 34713432
chr1 204555606 204555621 FOXP1 JASPAR yes 34713433
chr1 204555606 204555627 IRF1 JASPAR yes 34713434
chr1 204555607 204555622 FOXP1 JASPAR yes 34713435
chr1 204555607 204555627 RREB1 JASPAR yes 34713436
chr1 204555607 204555628 IRF1 JASPAR yes 34713437
chr1 204555608 204555623 FOXP1 JASPAR yes 34713438
chr1 204555608 204555629 IRF1 JASPAR yes 34713439
chr1 204555609 204555624 FOXP1 JASPAR yes 34713440
chr1 204555610 204555625 FOXP1 JASPAR yes 34713441
chr1 204555611 204555626 FOXP1 JASPAR yes 34713442
chr1 204555612 204555627 FOXP1 JASPAR yes 34713443
chr1 204555612 204555632 RREB1 JASPAR yes 34713444
chr1 204555612 204555633 IRF1 JASPAR yes 34713445
chr1 204555613 204555634 IRF1 JASPAR yes 34713446
chr1 204555614 204555629 FOXP1 JASPAR yes 34713447
chr1 204555614 204555634 RREB1 JASPAR yes 34713448
Genes associated with rs548530959[chr1:204555617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More