EnhancerDB
  1. Home
  2. SNP
  3. rs548540808[chr19:10349823]
Enhancers that have rs548540808[chr19:10349823]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10331225 10355975 enh5000
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs548540808[chr19:10349823]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10349699 10350160 ZNF274 GTRD no Blood (GM12878) 21848583
chr19 10349699 10350160 ZNF274 GTRD no Blood (GM12878) 108383096
chr19 10349769 10350285 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848584
chr19 10349769 10350285 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108383097
chr19 10349812 10350248 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848585
chr19 10349812 10350248 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108383098
chr19 10349814 10350250 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21848586
chr19 10349814 10350250 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108383099
chr19 10349815 10349831 ZNF143 JASPAR yes 112415917
chr19 10349823 10349828 SP1 TRANSFAC yes 112415919
Genes associated with rs548540808[chr19:10349823], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More