EnhancerDB
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  3. rs548553891[chr1:52425183]
Enhancers that have rs548553891[chr1:52425183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52410065 52425504 enh361
Brain (SK-N-MC) Prostate (RWPE1) Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9)
Transcript factors that have rs548553891[chr1:52425183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52425176 52425194 SRF JASPAR yes 28878381
chr1 52425178 52425189 STAT3 JASPAR yes 28878382
chr1 52425178 52425193 MEF2C JASPAR yes 28878383
chr1 52425183 52425197 SPI1 JASPAR yes 28878384
chr1 52425183 52425197 SPIC JASPAR yes 28878385
Genes associated with rs548553891[chr1:52425183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More