EnhancerDB
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  3. rs548559854[chr2:122359265]
Enhancers that have rs548559854[chr2:122359265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 122350905 122363015 enh5814
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Brain (SK-N-SH) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Thymus Heart
Transcript factors that have rs548559854[chr2:122359265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 122359244 122359265 IRF1 JASPAR yes 76629527
Genes associated with rs548559854[chr2:122359265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More