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- rs548736639[chr1:178041677]
Enhancers that have rs548736639[chr1:178041677]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
178041559 |
178041872 |
vista4025 |
|
|
Transcript factors that have rs548736639[chr1:178041677]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
178041594
|
178041917
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
107847282
|
|
|
chr1
|
178041674
|
178041681
|
NFATC2
|
JASPAR
|
yes
|
|
118404902
|
|
|
chr1
|
178041674
|
178041685
|
NFKB1
|
JASPAR
|
yes
|
|
118404903
|
|
|
chr1
|
178041675
|
178041685
|
REL
|
JASPAR
|
yes
|
|
118404904
|
|
|
chr1
|
178041675
|
178041686
|
NFKB1
|
JASPAR
|
yes
|
|
118404905
|
|
Genes associated with rs548736639[chr1:178041677], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |