EnhancerDB
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  3. rs548742982[chr6:43811945]
Enhancers that have rs548742982[chr6:43811945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43752825 43813215 enh23254
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548742982[chr6:43811945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43811933 43811948 TP53 JASPAR yes 101792531
chr6 43811940 43811952 PKNOX1 JASPAR yes 101792532
chr6 43811940 43811952 PKNOX2 JASPAR yes 101792533
chr6 43811940 43811952 TGIF1 JASPAR yes 101792534
chr6 43811940 43811952 TGIF2 JASPAR yes 101792535
chr6 43811943 43811954 DMRT3 JASPAR yes 101792536
Genes associated with rs548742982[chr6:43811945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More