EnhancerDB
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  3. rs548745239[chr19:14662981]
Enhancers that have rs548745239[chr19:14662981]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14658964 14673635 enh5022
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548745239[chr19:14662981]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14662961 14662982 IRF1 JASPAR yes 112578284
chr19 14662963 14662984 IRF1 JASPAR yes 112578285
chr19 14662967 14662988 IRF1 JASPAR yes 112578286
chr19 14662969 14662984 PRDM1 JASPAR yes 112578287
chr19 14662969 14662984 STAT2 JASPAR yes 112578288
chr19 14662970 14662984 SPIC JASPAR yes 112578289
chr19 14662970 14662984 STAT1 JASPAR yes 112578290
chr19 14662972 14662987 FOXP1 JASPAR yes 112578291
chr19 14662972 14662993 IRF1 JASPAR yes 112578292
chr19 14662973 14662994 IRF1 JASPAR yes 112578293
chr19 14662974 14662989 FOXP1 JASPAR yes 112578294
chr19 14662974 14662995 IRF1 JASPAR yes 112578295
chr19 14662978 14662999 IRF1 JASPAR yes 112578296
chr19 14662979 14662994 FOXP1 JASPAR yes 112578297
chr19 14662979 14663000 IRF1 JASPAR yes 112578298
chr19 14662981 14662996 FOXP1 JASPAR yes 112578299
Genes associated with rs548745239[chr19:14662981], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More