EnhancerDB
  1. Home
  2. SNP
  3. rs548800946[chr17:77878524]
Enhancers that have rs548800946[chr17:77878524]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs548800946[chr17:77878524]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77878516 77878529 ZBTB18 JASPAR yes 56226699
chr17 77878517 77878527 MSC JASPAR yes 56226700
chr17 77878517 77878527 MYF6 JASPAR yes 56226701
chr17 77878517 77878527 NHLH1 JASPAR yes 56226702
chr17 77878517 77878527 TFAP4 JASPAR yes 56226703
chr17 77878523 77878536 TFAP2A JASPAR yes 56226704
chr17 77878523 77878536 TFAP2B JASPAR yes 56226705
Genes associated with rs548800946[chr17:77878524], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More