EnhancerDB
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  3. rs548820960[chr1:93588821]
Enhancers that have rs548820960[chr1:93588821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 93586825 93592615 enh49906
Neural Stem Cells (H9) Brain (SK-N-MC) Large Intestine
Transcript factors that have rs548820960[chr1:93588821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 93588807 93588828 IRF1 JASPAR yes 30793260
chr1 93588809 93588824 PRDM1 JASPAR yes 30793261
chr1 93588809 93588830 IRF1 JASPAR yes 30793262
chr1 93588811 93588832 IRF1 JASPAR yes 30793263
chr1 93588813 93588834 IRF1 JASPAR yes 30793264
chr1 93588814 93588829 FOXP1 JASPAR yes 30793265
chr1 93588815 93588830 STAT2 JASPAR yes 30793266
chr1 93588816 93588831 FOXP1 JASPAR yes 30793267
chr1 93588818 93588833 FOXP1 JASPAR yes 30793268
chr1 93588819 93588834 FOXP1 JASPAR yes 30793269
chr1 93588820 93588835 FOXP1 JASPAR yes 30793270
Genes associated with rs548820960[chr1:93588821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More