EnhancerDB
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  3. rs548860369[chr19:3175411]
Enhancers that have rs548860369[chr19:3175411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3170105 3178875 enh17860
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Breast Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs548860369[chr19:3175411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3175407 3175417 ID4 JASPAR yes 112115144
chr19 3175407 3175417 MSC JASPAR yes 112115145
chr19 3175407 3175417 TCF3 JASPAR yes 112115146
chr19 3175408 3175417 SNAI2 JASPAR yes 112115147
chr19 3175409 3175414 USF2 TRANSFAC yes 112115148
Genes associated with rs548860369[chr19:3175411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More