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- rs548897206[chr1:1059449]
Enhancers that have rs548897206[chr1:1059449]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
1054845 |
1062895 |
enh49635 |
|
|
Transcript factors that have rs548897206[chr1:1059449]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
1057814
|
1061142
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107801772
|
|
|
chr1
|
1059438
|
1059450
|
NHLH1
|
JASPAR
|
yes
|
|
26181359
|
|
|
chr1
|
1059439
|
1059449
|
ID4
|
JASPAR
|
yes
|
|
26181360
|
|
|
chr1
|
1059439
|
1059449
|
NHLH1
|
JASPAR
|
yes
|
|
26181361
|
|
|
chr1
|
1059439
|
1059449
|
TCF3
|
JASPAR
|
yes
|
|
26181362
|
|
|
chr1
|
1059439
|
1059449
|
TCF4
|
JASPAR
|
yes
|
|
26181363
|
|
|
chr1
|
1059440
|
1059449
|
SNAI2
|
JASPAR
|
yes
|
|
26181364
|
|
|
chr1
|
1059440
|
1059451
|
NRF1
|
JASPAR
|
yes
|
|
26181365
|
|
Genes associated with rs548897206[chr1:1059449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |