EnhancerDB
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  3. rs548997083[chr17:64938564]
Enhancers that have rs548997083[chr17:64938564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64937699 64952845 enh17319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs548997083[chr17:64938564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64937384 64941120 ZNF143 GTRD no Epithelial (MCF-7) 21781904
chr17 64937407 64941181 ZNF143 GTRD no Epithelial (MCF-7) 21781905
chr17 64937545 64939498 ZNF143 GTRD no Epithelial (MCF-7) 21781906
chr17 64937651 64941627 ZNF143 GTRD no Epithelial (MCF-7) 21781907
chr17 64938475 64939651 ZNF143 GTRD no Epithelial (MCF-7) 21781911
chr17 64938518 64939319 ZNF143 GTRD no Epithelial (MCF-7) 21781912
chr17 64938531 64939467 ZNF143 GTRD no Epithelial (MCF-7) 21781913
chr17 64938533 64939553 ZNF143 GTRD no Epithelial (MCF-7) 21781914
chr17 64938563 64939494 ZNF274 GTRD no Cervix (HeLa-S3) 21781915
chr17 64938564 64938578 STAT1 JASPAR yes 55472198
Genes associated with rs548997083[chr17:64938564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More