EnhancerDB
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  3. rs549002615[chr4:89714535]
Enhancers that have rs549002615[chr4:89714535]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 89710485 89718375 enh36803
Prostate (PC-3) Brain (SK-N-MC) Esophagus Astrocyte Thyroid Neural Stem Cells (H9)
Transcript factors that have rs549002615[chr4:89714535]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 89714527 89714537 EMX1 JASPAR yes 91184848
chr4 89714527 89714537 GBX2 JASPAR yes 91184849
chr4 89714527 89714537 GSX1 JASPAR yes 91184850
chr4 89714527 89714537 GSX2 JASPAR yes 91184851
chr4 89714527 89714537 HOXB2 JASPAR yes 91184852
chr4 89714527 89714537 HOXB3 JASPAR yes 91184853
chr4 89714527 89714537 MEOX1 JASPAR yes 91184854
chr4 89714527 89714537 MEOX2 JASPAR yes 91184855
chr4 89714527 89714537 MIXL1 JASPAR yes 91184856
chr4 89714527 89714537 MNX1 JASPAR yes 91184857
chr4 89714527 89714538 HOXA10 JASPAR yes 91184858
chr4 89714528 89714536 LMX1A JASPAR yes 91184859
chr4 89714528 89714536 LMX1B JASPAR yes 91184860
chr4 89714528 89714536 NKX6-1 JASPAR yes 91184861
chr4 89714528 89714536 NKX6-2 JASPAR yes 91184862
chr4 89714528 89714536 PDX1 JASPAR yes 91184863
chr4 89714528 89714536 VAX1 JASPAR yes 91184864
chr4 89714528 89714536 VAX2 JASPAR yes 91184865
chr4 89714528 89714536 VSX1 JASPAR yes 91184866
chr4 89714528 89714541 DUXA JASPAR yes 91184867
chr4 89714529 89714540 PHOX2A JASPAR yes 91184868
chr4 89714529 89714540 PROP1 JASPAR yes 91184869
Genes associated with rs549002615[chr4:89714535], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More