EnhancerDB
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  3. rs549006734[chr1:200454619]
Enhancers that have rs549006734[chr1:200454619]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200450387 200461835 enh12512
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs549006734[chr1:200454619]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200452697 200455179 ZNF274 GTRD no Cervix (HeLa-S3) 21363654
chr1 200454616 200454635 PAX5 JASPAR yes 34454118
chr1 200454618 200454622 LFA1 TRANSFAC yes 34454119
Genes associated with rs549006734[chr1:200454619], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More