EnhancerDB
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  3. rs549013603[chr1:41173521]
Enhancers that have rs549013603[chr1:41173521]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41162745 41176935 enh274
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs549013603[chr1:41173521]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41173518 41173533 FOXP1 JASPAR yes 28337261
chr1 41173519 41173534 FOXP1 JASPAR yes 28337262
chr1 41173520 41173535 FOXP1 JASPAR yes 28337263
chr1 41173520 41173541 IRF1 JASPAR yes 28337264
chr1 41173521 41173536 FOXP1 JASPAR yes 28337265
chr1 41173521 41173542 IRF1 JASPAR yes 28337266
Genes associated with rs549013603[chr1:41173521], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More