EnhancerDB
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Enhancers that have rs549059512[chr19:2956710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2951125 2958675 enh17856
Large Intestine Placenta Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs549059512[chr19:2956710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2956113 2957138 ZNF143 GTRD no Epithelial (MCF-7) 21838314
chr19 2956245 2957172 ZNF143 GTRD no Epithelial (MCF-7) 21838315
chr19 2956309 2956835 ZNF143 GTRD no Epithelial (MCF-7) 21838317
chr19 2956318 2956787 ZNF143 GTRD no Epithelial (MCF-7) 21838318
chr19 2956334 2956919 ZNF143 GTRD no Epithelial (MCF-7) 21838319
chr19 2956403 2956791 ZNF143 GTRD no Epithelial (MCF-7) 21838320
chr19 2956428 2956900 ZNF143 GTRD no Epithelial (MCF-7) 21838321
chr19 2956445 2956915 ZNF143 GTRD no Epithelial (MCF-7) 21838322
chr19 2956689 2956710 IRF1 JASPAR yes 112103502
chr19 2956693 2956713 RREB1 JASPAR yes 112103506
chr19 2956694 2956715 IRF1 JASPAR yes 112103507
chr19 2956695 2956710 FOXP1 JASPAR yes 112103509
chr19 2956698 2956710 IRF1 JASPAR yes 112103510
chr19 2956698 2956718 RREB1 JASPAR yes 112103511
chr19 2956700 2956715 FOXP1 JASPAR yes 112103513
chr19 2956703 2956715 IRF1 JASPAR yes 112103514
chr19 2956705 2956711 TCF4 TRANSFAC yes 112103515
chr19 2956705 2956720 FOXP1 JASPAR yes 112103516
chr19 2956710 2956716 TCF4 TRANSFAC yes 112103517
Genes associated with rs549059512[chr19:2956710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More