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- rs549106978[chr17:198320]
Enhancers that have rs549106978[chr17:198320]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
196245 |
201695 |
enh62575 |
|
|
Transcript factors that have rs549106978[chr17:198320]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
197325
|
198738
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108227568
|
|
|
chr17
|
197975
|
198991
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108227569
|
|
|
chr17
|
198058
|
198531
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108227570
|
|
|
chr17
|
198124
|
198670
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108227571
|
|
|
chr17
|
198320
|
198335
|
FOXP1
|
JASPAR
|
yes
|
|
52609987
|
|
Genes associated with rs549106978[chr17:198320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |