EnhancerDB
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  3. rs549110049[chr2:38305279]
Enhancers that have rs549110049[chr2:38305279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38302045 38309755 enh18453
Thyroid Placenta Neural Stem Cells (H9) Lung (PC-9)
Transcript factors that have rs549110049[chr2:38305279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38305277 38305288 HOXA10 JASPAR yes 73106656
chr2 38305277 38305292 HNF1A JASPAR yes 73106657
chr2 38305278 38305288 GSX2 JASPAR yes 73106658
chr2 38305278 38305288 HOXB2 JASPAR yes 73106659
chr2 38305278 38305288 HOXB3 JASPAR yes 73106660
chr2 38305278 38305288 MNX1 JASPAR yes 73106661
chr2 38305278 38305288 POU6F1 JASPAR yes 73106662
chr2 38305279 38305287 LMX1A JASPAR yes 73106663
chr2 38305279 38305287 LMX1B JASPAR yes 73106664
chr2 38305279 38305287 NKX6-1 JASPAR yes 73106665
chr2 38305279 38305287 NKX6-2 JASPAR yes 73106666
chr2 38305279 38305287 VAX1 JASPAR yes 73106667
chr2 38305279 38305287 VAX2 JASPAR yes 73106668
chr2 38305279 38305287 VSX1 JASPAR yes 73106669
chr2 38305279 38305287 VSX2 JASPAR yes 73106670
Genes associated with rs549110049[chr2:38305279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More