EnhancerDB
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  3. rs549139628[chr5:90593800]
Enhancers that have rs549139628[chr5:90593800]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90560003 90595415 enh22426
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
Transcript factors that have rs549139628[chr5:90593800]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90593790 90593809 RFX2 JASPAR yes 64189168
chr5 90593792 90593807 RFX5 JASPAR yes 64189169
chr5 90593794 90593810 RFX2 JASPAR yes 64189170
chr5 90593794 90593810 RFX3 JASPAR yes 64189171
chr5 90593794 90593810 RFX4 JASPAR yes 64189172
chr5 90593794 90593810 RFX5 JASPAR yes 64189173
Genes associated with rs549139628[chr5:90593800], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More