EnhancerDB
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  3. rs549156400[chr1:42107385]
Enhancers that have rs549156400[chr1:42107385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs549156400[chr1:42107385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42107384 42107392 MEIS3 JASPAR yes 28405181
chr1 42107385 42107397 PKNOX1 JASPAR yes 28405182
chr1 42107385 42107397 TGIF1 JASPAR yes 28405183
chr1 42107385 42107397 TGIF2 JASPAR yes 28405184
Genes associated with rs549156400[chr1:42107385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More