EnhancerDB
  1. Home
  2. SNP
  3. rs549210201[chr1:232356659]
Enhancers that have rs549210201[chr1:232356659]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232355377 232364194 enh43186
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myotube) Blood (T-cell)
chr1 232356410 232356670 vista5549
VISTA
Transcript factors that have rs549210201[chr1:232356659]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232356654 232356669 NR2C2 JASPAR yes 36144118
chr1 232356654 232356669 NR2C2 JASPAR yes 118480490
chr1 232356655 232356669 RXRB JASPAR yes 36144119
chr1 232356655 232356669 RXRG JASPAR yes 36144120
chr1 232356655 232356669 RXRB JASPAR yes 118480491
chr1 232356655 232356669 RXRG JASPAR yes 118480492
chr1 232356657 232356661 LFA1 TRANSFAC yes 36144121
chr1 232356657 232356661 LFA1 TRANSFAC yes 118480493
Genes associated with rs549210201[chr1:232356659], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More