EnhancerDB
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  3. rs549221224[chr1:220544523]
Enhancers that have rs549221224[chr1:220544523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs549221224[chr1:220544523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220544516 220544529 SMAD2 JASPAR yes 35489494
chr1 220544523 220544535 HES7 JASPAR yes 35489495
chr1 220544523 220544535 PKNOX1 JASPAR yes 35489496
chr1 220544523 220544535 PKNOX2 JASPAR yes 35489497
chr1 220544523 220544535 TGIF1 JASPAR yes 35489498
chr1 220544523 220544535 TGIF2 JASPAR yes 35489499
Genes associated with rs549221224[chr1:220544523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More