EnhancerDB
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  3. rs549274650[chr17:55597545]
Enhancers that have rs549274650[chr17:55597545]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55591785 55606415 enh4489
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Liver Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs549274650[chr17:55597545]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55597532 55597548 RFX2 JASPAR yes 54963863
chr17 55597532 55597548 RFX3 JASPAR yes 54963864
chr17 55597532 55597548 RFX4 JASPAR yes 54963865
chr17 55597532 55597548 RFX5 JASPAR yes 54963866
chr17 55597538 55597547 SRY JASPAR yes 54963868
chr17 55597539 55597551 PBX1 JASPAR yes 54963869
Genes associated with rs549274650[chr17:55597545], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More