EnhancerDB
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  3. rs549380796[chr12:122949586]
Enhancers that have rs549380796[chr12:122949586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs549380796[chr12:122949586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122949076 122949626 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21580058
chr12 122949167 122949623 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21580059
chr12 122949190 122950319 TCF7L2 GTRD no Colon (HCT116) 21580060
chr12 122949230 122950869 TCF7L2 GTRD no Colon (HCT116) 21580062
chr12 122949283 122950953 AR GTRD no Prostate (PC-3) 21580063
chr12 122949583 122949588 SP1 TRANSFAC yes 124282791
chr12 122949584 122949589 SP1 TRANSFAC yes 124282792
Genes associated with rs549380796[chr12:122949586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More