EnhancerDB
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Enhancers that have rs549390273[chr12:50056765]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50054615 50059261 enh51206
Large Intestine Blood (GM12878) Peripheral Blood (MM.1S) Heart Stomach
Transcript factors that have rs549390273[chr12:50056765]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50055250 50057642 ZBTB33 GTRD no Lung (A549) 108030460
chr12 50055280 50057758 ZNF143 GTRD no Epithelial (MCF-7) 108030461
chr12 50055363 50058069 ZNF143 GTRD no Epithelial (MCF-7) 108030462
chr12 50055377 50057663 ZNF274 GTRD no Cervix (HeLa-S3) 108030463
chr12 50055389 50057686 ZNF274 GTRD no Cervix (HeLa-S3) 108030464
chr12 50055406 50057701 ZBTB33 GTRD no Lung (A549) 108030465
chr12 50055411 50058641 ZNF143 GTRD no Epithelial (MCF-7) 108030466
chr12 50055423 50057599 ZNF274 GTRD no Bone Marrow (K562) 108030467
chr12 50055477 50057780 ZBTB33 GTRD no Lung (A549) 108030468
chr12 50055516 50057362 ZNF274 GTRD no Bone Marrow (K562) 108030469
chr12 50055521 50057791 ZBTB33 GTRD no Lung (A549) 108030470
chr12 50055539 50057690 ZBTB33 GTRD no Lung (A549) 108030471
chr12 50055547 50057770 ZBTB33 GTRD no Lung (A549) 108030472
chr12 50055547 50058511 ZNF143 GTRD no Epithelial (MCF-7) 108030473
chr12 50055558 50057818 ZNF274 GTRD no Blood (GM12878) 21544711
chr12 50055558 50057818 ZNF274 GTRD no Blood (GM12878) 108030474
chr12 50055559 50057899 ZBTB33 GTRD no Lung (A549) 108030475
chr12 50055572 50058553 ZNF143 GTRD no Epithelial (MCF-7) 108030476
chr12 50055579 50060395 ZNF143 GTRD no Epithelial (MCF-7) 108030477
chr12 50055579 50060395 ZNF143 GTRD no Epithelial (MCF-7) 108030478
chr12 50055580 50057727 ZBTB33 GTRD no Lung (A549) 108030479
chr12 50055593 50057931 ZNF143 GTRD no Epithelial (MCF-7) 108030480
chr12 50055608 50057899 ZNF143 GTRD no Epithelial (MCF-7) 108030481
chr12 50055611 50058366 ZNF143 GTRD no Epithelial (MCF-7) 108030482
chr12 50055626 50058441 ZBTB33 GTRD no Lung (A549) 108030483
chr12 50055627 50057439 ZNF274 GTRD no Blood (GM12878) 21544712
chr12 50055627 50057439 ZNF274 GTRD no Blood (GM12878) 108030484
chr12 50055635 50057332 ZNF274 GTRD no Bone Marrow (K562) 108030485
chr12 50055636 50057712 ZNF274 GTRD no Blood (GM12878) 21544713
chr12 50055636 50057712 ZNF274 GTRD no Blood (GM12878) 108030486
chr12 50055663 50058467 ZNF143 GTRD no Epithelial (MCF-7) 108030487
chr12 50055678 50060309 ZNF143 GTRD no Epithelial (MCF-7) 108030488
chr12 50055678 50060309 ZNF143 GTRD no Epithelial (MCF-7) 108030489
chr12 50055692 50058112 ZNF143 GTRD no Epithelial (MCF-7) 108030490
chr12 50055697 50058579 TCF7L2 GTRD no Colon (HCT116) 108030491
chr12 50055710 50057558 ZNF274 GTRD no Liver (HepG2) 108030492
chr12 50055717 50059338 TCF7L2 GTRD no Colon (HCT116) 108030493
chr12 50055717 50059338 TCF7L2 GTRD no Colon (HCT116) 108030494
chr12 50056290 50057950 ZNF274 GTRD no Bone Marrow (K562) 108030495
chr12 50056544 50057293 POLR2A UCSC Txn Factor no Conserved 108030496
chr12 50056558 50057250 ZNF274 GTRD no Blood (GM12878) 21544714
chr12 50056558 50057250 ZNF274 GTRD no Blood (GM12878) 108030497
chr12 50056581 50057231 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108030498
chr12 50056593 50057939 ZNF143 GTRD no Epithelial (MCF-7) 108030499
chr12 50056612 50058497 ZNF143 GTRD no Epithelial (MCF-7) 108030500
chr12 50056622 50057880 ZNF274 GTRD no Cervix (HeLa-S3) 108030501
chr12 50056627 50057127 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544715
chr12 50056627 50057127 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030502
chr12 50056630 50057010 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544716
chr12 50056630 50057010 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030503
chr12 50056642 50057272 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544717
chr12 50056642 50057272 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030504
chr12 50056646 50058248 ZNF274 GTRD no Bone Marrow (K562) 108030505
chr12 50056653 50057089 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544718
chr12 50056653 50057089 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030506
chr12 50056672 50057268 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544719
chr12 50056672 50057268 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030507
chr12 50056674 50057004 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030508
chr12 50056674 50057069 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544720
chr12 50056674 50057069 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030509
chr12 50056676 50057020 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030510
chr12 50056677 50057960 ZNF143 GTRD no Epithelial (MCF-7) 108030511
chr12 50056677 50058135 ZNF274 GTRD no Bone Marrow (K562) 108030512
chr12 50056681 50057081 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030513
chr12 50056688 50057028 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544721
chr12 50056688 50057028 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030514
chr12 50056690 50057110 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544722
chr12 50056690 50057110 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030515
chr12 50056693 50057705 ZNF274 GTRD no Bone Marrow (K562) 108030516
chr12 50056695 50057085 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030517
chr12 50056706 50057222 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544723
chr12 50056706 50057222 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030518
chr12 50056713 50057149 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030519
chr12 50056714 50057170 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030520
chr12 50056717 50057270 ZNF274 GTRD no Blood (GM12878) 21544724
chr12 50056717 50057270 ZNF274 GTRD no Blood (GM12878) 108030521
chr12 50056726 50057130 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030522
chr12 50056727 50057541 ZNF274 GTRD no Bone Marrow (K562) 108030523
chr12 50056732 50057495 ZNF274 GTRD no Cervix (HeLa-S3) 108030524
chr12 50056742 50057178 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544725
chr12 50056742 50057178 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030525
chr12 50056744 50058014 ZBTB33 GTRD no Lung (A549) 108030526
chr12 50056751 50057007 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030527
chr12 50056753 50057123 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030528
chr12 50056753 50057197 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108030529
chr12 50056756 50056769 TFAP2A JASPAR yes 120790770
chr12 50056756 50056769 TFAP2B JASPAR yes 120790771
chr12 50056756 50056769 TFAP2C JASPAR yes 120790772
chr12 50056759 50057063 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21544726
chr12 50056759 50057063 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030530
chr12 50056762 50057098 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108030531
chr12 50056764 50056769 SP1 TRANSFAC yes 120790773
chr12 50056765 50058253 TCF7L2 GTRD no Colon (HCT116) 108030532
Genes associated with rs549390273[chr12:50056765], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More