EnhancerDB
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  3. rs549407001[chr15:40180453]
Enhancers that have rs549407001[chr15:40180453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40165269 40184115 enh31319
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Ovary Astrocyte Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs549407001[chr15:40180453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40180115 40180751 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21649093
chr15 40180115 40180751 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108133367
chr15 40180217 40180487 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108133371
chr15 40180437 40180457 RREB1 JASPAR yes 22917805
chr15 40180438 40180458 RREB1 JASPAR yes 22917806
chr15 40180439 40180459 RREB1 JASPAR yes 22917807
chr15 40180440 40180460 RREB1 JASPAR yes 22917808
chr15 40180441 40180461 RREB1 JASPAR yes 22917809
chr15 40180442 40180462 RREB1 JASPAR yes 22917810
chr15 40180450 40180462 ZBTB7B JASPAR yes 22917811
chr15 40180451 40180461 ZNF740 JASPAR yes 22917812
Genes associated with rs549407001[chr15:40180453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More