EnhancerDB
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  3. rs549448626[chr1:169276662]
Enhancers that have rs549448626[chr1:169276662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169275965 169283797 enh27212
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Large Intestine Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Epithelial (MCF-7)
Transcript factors that have rs549448626[chr1:169276662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169276649 169276664 SCRT1 JASPAR yes 32997266
chr1 169276653 169276662 SNAI2 JASPAR yes 32997267
chr1 169276653 169276663 FIGLA JASPAR yes 32997268
chr1 169276653 169276663 ID4 JASPAR yes 32997269
chr1 169276653 169276663 MSC JASPAR yes 32997270
chr1 169276653 169276663 MYF6 JASPAR yes 32997271
chr1 169276653 169276663 TCF3 JASPAR yes 32997272
chr1 169276653 169276663 TCF4 JASPAR yes 32997273
chr1 169276655 169276664 ZEB1 JASPAR yes 32997274
chr1 169276656 169276664 TBX5 JASPAR yes 32997275
chr1 169276658 169276673 FOXA1 JASPAR yes 32997276
chr1 169276659 169276670 FOXB1 JASPAR yes 32997277
chr1 169276659 169276670 FOXC1 JASPAR yes 32997278
chr1 169276659 169276671 FOXC2 JASPAR yes 32997279
chr1 169276661 169276676 SCRT1 JASPAR yes 32997280
chr1 169276662 169276670 FOXO3 JASPAR yes 32997281
Genes associated with rs549448626[chr1:169276662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More