EnhancerDB
  1. Home
  2. SNP
  3. rs549510058[chr18:55413699]
Enhancers that have rs549510058[chr18:55413699]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55408365 55419053 enh4864
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Blood (OCI-LY7) Muscle (A673) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Stomach
Transcript factors that have rs549510058[chr18:55413699]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55413692 55413706 SPIC JASPAR yes 110880630
chr18 55413693 55413714 IRF1 JASPAR yes 110880631
chr18 55413694 55413715 IRF1 JASPAR yes 110880632
chr18 55413695 55413710 PRDM1 JASPAR yes 110880633
chr18 55413695 55413710 STAT2 JASPAR yes 110880634
chr18 55413695 55413716 IRF1 JASPAR yes 110880635
chr18 55413696 55413717 IRF1 JASPAR yes 110880636
chr18 55413697 55413718 IRF1 JASPAR yes 110880637
chr18 55413698 55413713 FOXP1 JASPAR yes 110880638
chr18 55413698 55413719 IRF1 JASPAR yes 110880639
chr18 55413699 55413714 FOXP1 JASPAR yes 110880640
chr18 55413699 55413720 IRF1 JASPAR yes 110880641
Genes associated with rs549510058[chr18:55413699], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More