EnhancerDB
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  3. rs549571966[chr6:106997809]
Enhancers that have rs549571966[chr6:106997809]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 106992285 106999195 enh9275
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Breast
Transcript factors that have rs549571966[chr6:106997809]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 106997799 106997820 IRF1 JASPAR yes 104049100
chr6 106997803 106997818 PRDM1 JASPAR yes 104049101
chr6 106997808 106997814 TCF4 TRANSFAC yes 104049102
Genes associated with rs549571966[chr6:106997809], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More