EnhancerDB
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  3. rs549572862[chr11:66648519]
Enhancers that have rs549572862[chr11:66648519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 66643125 66662804 enh1843
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs549572862[chr11:66648519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 66648503 66648520 ESR1 JASPAR yes 39384940
chr11 66648517 66648532 ZIC3 JASPAR yes 39384941
chr11 66648518 66648529 TFAP2A JASPAR yes 39384942
chr11 66648518 66648529 TFAP2B JASPAR yes 39384943
chr11 66648518 66648530 TFAP2A JASPAR yes 39384944
chr11 66648518 66648530 TFAP2B JASPAR yes 39384945
chr11 66648518 66648530 TFAP2C JASPAR yes 39384946
chr11 66648519 66648528 TFAP2A JASPAR yes 39384947
Genes associated with rs549572862[chr11:66648519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More