EnhancerDB
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Enhancers that have rs549609778[chr1:10745731]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10726105 10750095 enh11495
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Liver Brain (SK-N-SH) Muscle (A673) Placenta Thyroid Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Heart
chr1 10745709 10746041 vista335
VISTA
Transcript factors that have rs549609778[chr1:10745731]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10745350 10745762 ZNF274 GTRD no Cervix (HeLa-S3) 107802050
chr1 10745717 10745732 TFAP2A JASPAR yes 26735493
chr1 10745717 10745732 TFAP2A JASPAR yes 118228934
chr1 10745720 10745732 TFAP2A JASPAR yes 26735494
chr1 10745720 10745732 TFAP2B JASPAR yes 26735495
chr1 10745720 10745732 TFAP2C JASPAR yes 26735496
chr1 10745720 10745732 TFAP2A JASPAR yes 118228935
chr1 10745720 10745732 TFAP2B JASPAR yes 118228936
chr1 10745720 10745732 TFAP2C JASPAR yes 118228937
chr1 10745720 10745735 TFAP2A JASPAR yes 26735497
chr1 10745720 10745735 TFAP2A JASPAR yes 118228938
chr1 10745722 10745731 TFAP2A JASPAR yes 26735499
chr1 10745722 10745731 TFAP2A JASPAR yes 118228940
chr1 10745727 10745731 LFA1 TRANSFAC yes 26735500
chr1 10745727 10745731 LFA1 TRANSFAC yes 118228941
Genes associated with rs549609778[chr1:10745731], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More