EnhancerDB
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  3. rs549651668[chr1:172717630]
Enhancers that have rs549651668[chr1:172717630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs549651668[chr1:172717630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172717475 172718162 ZNF143 GTRD no Epithelial (MCF-7) 21350241
chr1 172717502 172718293 ZBTB33 GTRD no Lung (A549) 21350242
chr1 172717512 172718364 ZBTB33 GTRD no Lung (A549) 21350243
chr1 172717539 172718143 ZNF143 GTRD no Epithelial (MCF-7) 21350244
chr1 172717542 172718064 ZBTB33 GTRD no Lung (A549) 21350245
chr1 172717562 172718257 ZBTB33 GTRD no Lung (A549) 21350246
chr1 172717562 172718272 ZBTB33 GTRD no Lung (A549) 21350247
chr1 172717567 172718172 ZBTB33 GTRD no Lung (A549) 21350248
chr1 172717581 172717977 ZNF143 GTRD no Epithelial (MCF-7) 21350249
chr1 172717598 172718263 ZBTB33 GTRD no Lung (A549) 21350250
chr1 172717614 172718175 ZBTB33 GTRD no Lung (A549) 21350251
chr1 172717625 172717640 TFAP2C JASPAR yes 33151300
chr1 172717627 172717640 TFAP2A JASPAR yes 33151301
chr1 172717627 172717640 TFAP2B JASPAR yes 33151302
chr1 172717627 172717640 TFAP2C JASPAR yes 33151303
chr1 172717628 172717639 EBF1 JASPAR yes 33151304
Genes associated with rs549651668[chr1:172717630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More