EnhancerDB
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  3. rs549678668[chr1:204490860]
Enhancers that have rs549678668[chr1:204490860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204487665 204493515 enh887
Blood (T-cell) Esophagus Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs549678668[chr1:204490860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204490856 204490860 YY1 TRANSFAC yes 34708796
chr1 204490859 204490863 TEAD2 TRANSFAC yes 34708797
chr1 204490859 204490869 MNX1 JASPAR yes 34708798
chr1 204490859 204490869 POU6F1 JASPAR yes 34708799
chr1 204490860 204490868 LMX1A JASPAR yes 34708800
chr1 204490860 204490868 LMX1B JASPAR yes 34708801
chr1 204490860 204490868 NKX6-1 JASPAR yes 34708802
chr1 204490860 204490868 NKX6-2 JASPAR yes 34708803
chr1 204490860 204490868 VAX1 JASPAR yes 34708804
chr1 204490860 204490868 VAX2 JASPAR yes 34708805
chr1 204490860 204490868 VSX1 JASPAR yes 34708806
chr1 204490860 204490868 VSX2 JASPAR yes 34708807
Genes associated with rs549678668[chr1:204490860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More