EnhancerDB
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  3. rs549721979[chr10:32056386]
Enhancers that have rs549721979[chr10:32056386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 32055245 32065680 enh13129
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube)
Transcript factors that have rs549721979[chr10:32056386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 32055053 32056708 ZNF274 GTRD no Cervix (HeLa-S3) 21427285
chr10 32055055 32056819 ZNF274 GTRD no Cervix (HeLa-S3) 21427286
chr10 32055196 32056775 ZNF274 GTRD no Cervix (HeLa-S3) 21427287
chr10 32055243 32056753 TCF7L2 GTRD no Colon (HCT116) 21427288
chr10 32055263 32057312 ZNF274 GTRD no Cervix (HeLa-S3) 21427289
chr10 32055288 32056943 ZBTB33 GTRD no Brain (SK-N-SH) 21427292
chr10 32055297 32056891 ZNF274 GTRD no Cervix (HeLa-S3) 21427293
chr10 32055320 32056719 ZBTB33 GTRD no Brain (SK-N-SH) 21427294
chr10 32055326 32056781 ZBTB33 GTRD no Brain (SK-N-SH) 21427295
chr10 32055343 32056846 ZBTB33 GTRD no Brain (SK-N-SH) 21427296
chr10 32055351 32056748 TCF7L2 GTRD no Colon (HCT116) 21427297
chr10 32055352 32056870 ZBTB33 GTRD no Brain (SK-N-SH) 21427298
chr10 32055357 32056809 ZBTB33 GTRD no Brain (SK-N-SH) 21427300
chr10 32055396 32056834 TCF7L2 GTRD no Colon (HCT116) 21427301
chr10 32055411 32056896 TCF7L2 GTRD no Colon (HCT116) 21427302
chr10 32055413 32056674 TCF7L2 GTRD no Colon (HCT116) 21427303
chr10 32055418 32056423 TCF7L2 GTRD no Colon (HCT116) 21427305
chr10 32055467 32056731 TCF7L2 GTRD no Colon (HCT116) 21427308
chr10 32055475 32056772 ZBTB33 GTRD no Brain (SK-N-SH) 21427309
chr10 32055489 32056759 TCF7L2 GTRD no Colon (HCT116) 21427310
chr10 32055501 32056890 TCF7L2 GTRD no Colon (HCT116) 21427311
chr10 32055504 32056750 TCF7L2 GTRD no Colon (HCT116) 21427312
chr10 32055505 32056643 TCF7L2 GTRD no Colon (HCT116) 21427313
chr10 32055543 32056787 TCF7L2 GTRD no Colon (HCT116) 21427314
chr10 32055596 32056868 TCF7L2 GTRD no Colon (HCT116) 21427316
chr10 32055763 32056736 TCF7L2 GTRD no Colon (HCT116) 21427318
chr10 32055959 32056569 TCF7L2 GTRD no Colon (HCT116) 21427319
chr10 32055981 32056857 ZBTB33 GTRD no Brain (SK-N-SH) 21427320
chr10 32056013 32056781 ZBTB33 GTRD no Brain (SK-N-SH) 21427321
chr10 32056064 32056837 ZNF274 GTRD no Cervix (HeLa-S3) 21427322
chr10 32056093 32056530 ZNF274 GTRD no Cervix (HeLa-S3) 21427323
chr10 32056099 32056888 ZNF274 GTRD no Cervix (HeLa-S3) 21427324
chr10 32056144 32056740 ZNF274 GTRD no Cervix (HeLa-S3) 21427325
chr10 32056230 32056711 ZNF274 GTRD no Cervix (HeLa-S3) 21427326
chr10 32056366 32056386 RREB1 JASPAR yes 126495976
chr10 32056367 32056387 RREB1 JASPAR yes 126495978
chr10 32056371 32056391 RREB1 JASPAR yes 126495980
chr10 32056374 32056394 RREB1 JASPAR yes 126495981
chr10 32056376 32056388 FOXC2 JASPAR yes 126495983
chr10 32056379 32056399 RREB1 JASPAR yes 126495984
chr10 32056379 32056400 IRF1 JASPAR yes 126495985
chr10 32056384 32056404 RREB1 JASPAR yes 126495986
chr10 32056385 32056406 IRF1 JASPAR yes 126495987
chr10 32056386 32056392 TCF4 TRANSFAC yes 126495988
chr10 32056386 32056401 FOXP1 JASPAR yes 126495989
Genes associated with rs549721979[chr10:32056386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More