EnhancerDB
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  3. rs549723679[chr16:88569437]
Enhancers that have rs549723679[chr16:88569437]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88556185 88579980 enh52393
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Pancreas Heart
Transcript factors that have rs549723679[chr16:88569437]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88569430 88569439 SNAI2 JASPAR yes 12292062
chr16 88569430 88569440 TCF4 JASPAR yes 12292063
chr16 88569431 88569446 NR2C2 JASPAR yes 12292064
chr16 88569432 88569441 ZEB1 JASPAR yes 12292065
chr16 88569433 88569441 TBX15 JASPAR yes 12292066
chr16 88569434 88569439 SP1 TRANSFAC yes 12292067
Genes associated with rs549723679[chr16:88569437], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More