EnhancerDB
  1. Home
  2. SNP
  3. rs549782959[chr1:29574676]
Enhancers that have rs549782959[chr1:29574676]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29562585 29578758 enh11690
Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs549782959[chr1:29574676]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29574665 29574683 RARA JASPAR yes 27809500
chr1 29574673 29574691 NR3C1 JASPAR yes 27809501
chr1 29574673 29574691 RARA JASPAR yes 27809502
chr1 29574675 29574679 ESR1 TRANSFAC yes 27809503
Genes associated with rs549782959[chr1:29574676], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More