EnhancerDB
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  3. rs549886472[chr6:109652537]
Enhancers that have rs549886472[chr6:109652537]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109652045 109675195 enh23490
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-SH) Lung Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Spleen Heart
Transcript factors that have rs549886472[chr6:109652537]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109652526 109652538 PKNOX2 JASPAR yes 104244239
chr6 109652526 109652546 TP63 JASPAR yes 104244240
chr6 109652530 109652543 SMAD2 JASPAR yes 104244241
chr6 109652533 109652547 TLX1 JASPAR yes 104244242
Genes associated with rs549886472[chr6:109652537], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More