EnhancerDB
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  3. rs549939400[chr16:85397290]
Enhancers that have rs549939400[chr16:85397290]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85390172 85421515 enh16868
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Heart
Transcript factors that have rs549939400[chr16:85397290]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85392620 85397953 ZNF274 GTRD no Bone Marrow (K562) 21724054
chr16 85392620 85397953 ZNF274 GTRD no Bone Marrow (K562) 108213887
chr16 85392620 85397953 ZNF274 GTRD no Bone Marrow (K562) 108213888
chr16 85392623 85398658 ZNF143 GTRD no Epithelial (MCF-7) 21724055
chr16 85392623 85398658 ZNF143 GTRD no Epithelial (MCF-7) 108213889
chr16 85392623 85398658 ZNF143 GTRD no Epithelial (MCF-7) 108213890
chr16 85392632 85398764 ZNF143 GTRD no Epithelial (MCF-7) 21724056
chr16 85392632 85398764 ZNF143 GTRD no Epithelial (MCF-7) 108213891
chr16 85392632 85398764 ZNF143 GTRD no Epithelial (MCF-7) 108213892
chr16 85392632 85398764 ZNF143 GTRD no Epithelial (MCF-7) 108213893
chr16 85392675 85397452 TCF7L2 GTRD no Colon (HCT116) 108213894
chr16 85392698 85398227 TCF7L2 GTRD no Colon (HCT116) 108213895
chr16 85392698 85398227 TCF7L2 GTRD no Colon (HCT116) 108213896
chr16 85393574 85398078 TCF7L2 GTRD no Colon (HCT116) 108213902
chr16 85393574 85398078 TCF7L2 GTRD no Colon (HCT116) 108213903
chr16 85393605 85397963 ZNF143 GTRD no Epithelial (MCF-7) 21724118
chr16 85393605 85397963 ZNF143 GTRD no Epithelial (MCF-7) 108213904
chr16 85393605 85397963 ZNF143 GTRD no Epithelial (MCF-7) 108213905
chr16 85393605 85397980 ZNF143 GTRD no Epithelial (MCF-7) 21724119
chr16 85393605 85397980 ZNF143 GTRD no Epithelial (MCF-7) 108213906
chr16 85393605 85397980 ZNF143 GTRD no Epithelial (MCF-7) 108213907
chr16 85393605 85398636 TCF7L2 GTRD no Colon (HCT116) 108213908
chr16 85393605 85398636 TCF7L2 GTRD no Colon (HCT116) 108213909
chr16 85394211 85399199 ZNF143 GTRD no Epithelial (MCF-7) 21724135
chr16 85394211 85399199 ZNF143 GTRD no Epithelial (MCF-7) 108213910
chr16 85394211 85399199 ZNF143 GTRD no Epithelial (MCF-7) 108213911
chr16 85394211 85399199 ZNF143 GTRD no Epithelial (MCF-7) 108213912
chr16 85394618 85398085 TCF7L2 GTRD no Colon (HCT116) 108213915
chr16 85394618 85398085 TCF7L2 GTRD no Colon (HCT116) 108213916
chr16 85395276 85398925 ZNF274 GTRD no Bone Marrow (K562) 21724173
chr16 85395276 85398925 ZNF274 GTRD no Bone Marrow (K562) 108213967
chr16 85395276 85398925 ZNF274 GTRD no Bone Marrow (K562) 108213968
chr16 85395276 85398925 ZNF274 GTRD no Bone Marrow (K562) 108213969
chr16 85395280 85397988 TCF7L2 GTRD no Colon (HCT116) 108213970
chr16 85395280 85397988 TCF7L2 GTRD no Colon (HCT116) 108213971
chr16 85396416 85398708 ZNF143 GTRD no Epithelial (MCF-7) 21724192
chr16 85396416 85398708 ZNF143 GTRD no Epithelial (MCF-7) 108214000
chr16 85396416 85398708 ZNF143 GTRD no Epithelial (MCF-7) 108214001
chr16 85396451 85397801 ZNF274 GTRD no Bone Marrow (K562) 21724193
chr16 85396451 85397801 ZNF274 GTRD no Bone Marrow (K562) 108214002
chr16 85396520 85397359 ZNF274 GTRD no Bone Marrow (K562) 21724194
chr16 85396699 85398148 ZNF274 GTRD no Bone Marrow (K562) 21724196
chr16 85396699 85398148 ZNF274 GTRD no Bone Marrow (K562) 108214003
chr16 85396784 85397944 ZNF274 GTRD no Liver (HepG2) 108214004
chr16 85396999 85397921 ZNF274 GTRD no Liver (HepG2) 108214005
chr16 85397003 85398121 ZNF143 GTRD no Epithelial (MCF-7) 21724197
chr16 85397003 85398121 ZNF143 GTRD no Epithelial (MCF-7) 108214006
chr16 85397027 85397762 P63 GTRD no Skin (Keratinocyte) 108214007
chr16 85397089 85397848 P63 GTRD no Skin (Keratinocyte) 108214008
chr16 85397091 85397977 ZNF274 GTRD no Bone Marrow (K562) 21724198
chr16 85397091 85397977 ZNF274 GTRD no Bone Marrow (K562) 108214009
chr16 85397095 85397912 ZNF143 GTRD no Epithelial (MCF-7) 21724199
chr16 85397095 85397912 ZNF143 GTRD no Epithelial (MCF-7) 108214010
chr16 85397101 85397794 ZBTB33 GTRD no Lung (A549) 108214011
chr16 85397108 85397991 ZNF274 GTRD no Bone Marrow (K562) 21724200
chr16 85397108 85397991 ZNF274 GTRD no Bone Marrow (K562) 108214012
chr16 85397113 85397944 ZNF274 GTRD no Liver (HepG2) 108214013
chr16 85397126 85397648 ZNF274 GTRD no Bone Marrow (K562) 21724201
chr16 85397126 85397648 ZNF274 GTRD no Bone Marrow (K562) 108214014
chr16 85397128 85397372 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21724202
chr16 85397128 85398534 ZNF274 GTRD no Bone Marrow (K562) 21724203
chr16 85397128 85398534 ZNF274 GTRD no Bone Marrow (K562) 108214015
chr16 85397156 85397938 ZBTB33 GTRD no Lung (A549) 108214016
chr16 85397157 85397842 ZNF274 GTRD no Bone Marrow (K562) 21724204
chr16 85397157 85397842 ZNF274 GTRD no Bone Marrow (K562) 108214017
chr16 85397159 85397903 ZNF143 GTRD no Epithelial (MCF-7) 21724205
chr16 85397159 85397903 ZNF143 GTRD no Epithelial (MCF-7) 108214018
chr16 85397163 85397892 ZNF274 GTRD no Liver (HepG2) 108214019
chr16 85397164 85399214 ZNF143 GTRD no Epithelial (MCF-7) 21724206
chr16 85397164 85399214 ZNF143 GTRD no Epithelial (MCF-7) 108214020
chr16 85397164 85399214 ZNF143 GTRD no Epithelial (MCF-7) 108214021
chr16 85397168 85397974 ZBTB33 GTRD no Lung (A549) 108214022
chr16 85397168 85398449 ZNF274 GTRD no Bone Marrow (K562) 21724207
chr16 85397168 85398449 ZNF274 GTRD no Bone Marrow (K562) 108214023
chr16 85397177 85397367 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21724208
chr16 85397181 85398128 ZNF143 GTRD no Epithelial (MCF-7) 21724209
chr16 85397181 85398128 ZNF143 GTRD no Epithelial (MCF-7) 108214024
chr16 85397185 85397927 ZNF274 GTRD no Bone Marrow (K562) 21724210
chr16 85397185 85397927 ZNF274 GTRD no Bone Marrow (K562) 108214025
chr16 85397186 85397919 ZNF274 GTRD no Liver (HepG2) 108214026
chr16 85397187 85397952 ZNF274 GTRD no Blood (GM12878) 108214027
chr16 85397191 85397924 ZNF274 GTRD no Liver (HepG2) 108214028
chr16 85397195 85397942 ZNF274 GTRD no Bone Marrow (K562) 21724211
chr16 85397195 85397942 ZNF274 GTRD no Bone Marrow (K562) 108214029
chr16 85397196 85397902 ZNF274 GTRD no Blood (GM12878) 108214030
chr16 85397198 85397997 ZNF274 GTRD no Blood (GM12878) 108214031
chr16 85397204 85397952 ZNF274 GTRD no Liver (HepG2) 108214032
chr16 85397213 85398014 ZNF274 GTRD no Bone Marrow (K562) 21724212
chr16 85397213 85398014 ZNF274 GTRD no Bone Marrow (K562) 108214033
chr16 85397213 85398016 ZNF274 GTRD no Bone Marrow (K562) 21724213
chr16 85397213 85398016 ZNF274 GTRD no Bone Marrow (K562) 108214034
chr16 85397217 85397965 ZNF274 GTRD no Liver (HepG2) 108214035
chr16 85397218 85397977 ZNF274 GTRD no Bone Marrow (K562) 21724214
chr16 85397218 85397977 ZNF274 GTRD no Bone Marrow (K562) 108214036
chr16 85397222 85398049 ZNF274 GTRD no Blood (GM12878) 108214037
chr16 85397224 85397828 TCF7L2 GTRD no Colon (HCT116) 108214038
chr16 85397225 85397844 ZNF274 GTRD no Liver (HepG2) 108214039
chr16 85397238 85397924 ZNF274 GTRD no Bone Marrow (K562) 21724215
chr16 85397238 85397924 ZNF274 GTRD no Bone Marrow (K562) 108214040
chr16 85397239 85397540 ZNF274 GTRD no Blood (GM12878) 108214041
chr16 85397247 85397694 P63 GTRD no Skin (Keratinocyte) 108214042
chr16 85397248 85397765 ZNF274 GTRD no Liver (HepG2) 108214043
chr16 85397255 85397853 ZNF274 GTRD no Liver (HepG2) 108214044
chr16 85397265 85398090 ZBTB33 GTRD no Lung (A549) 108214045
chr16 85397268 85397903 TCF7L2 GTRD no Colon (HCT116) 108214046
chr16 85397271 85397616 ZNF274 GTRD no Bone Marrow (K562) 21724216
chr16 85397271 85397616 ZNF274 GTRD no Bone Marrow (K562) 108214047
chr16 85397271 85397936 ZNF274 GTRD no Bone Marrow (K562) 21724217
chr16 85397271 85397936 ZNF274 GTRD no Bone Marrow (K562) 108214048
chr16 85397273 85397843 ZNF274 GTRD no Bone Marrow (K562) 21724218
chr16 85397273 85397843 ZNF274 GTRD no Bone Marrow (K562) 108214049
chr16 85397273 85397997 ZNF274 GTRD no Bone Marrow (K562) 21724219
chr16 85397273 85397997 ZNF274 GTRD no Bone Marrow (K562) 108214050
chr16 85397284 85397865 ZBTB33 GTRD no Lung (A549) 108214051
Genes associated with rs549939400[chr16:85397290], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More