EnhancerDB
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  3. rs549953301[chr1:42132146]
Enhancers that have rs549953301[chr1:42132146]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549953301[chr1:42132146]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42132141 42132156 STAT1 JASPAR yes 28407371
chr1 42132143 42132154 STAT1 JASPAR yes 28407372
chr1 42132143 42132154 STAT3 JASPAR yes 28407373
Genes associated with rs549953301[chr1:42132146], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More