EnhancerDB
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  3. rs550111662[chr17:77885416]
Enhancers that have rs550111662[chr17:77885416]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs550111662[chr17:77885416]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77884616 77885558 ZNF143 GTRD no Epithelial (MCF-7) 21796489
chr17 77884703 77885492 ZNF143 GTRD no Epithelial (MCF-7) 21796490
chr17 77884727 77885554 ZNF143 GTRD no Epithelial (MCF-7) 21796491
chr17 77885415 77885429 PLAG1 JASPAR yes 56227722
chr17 77885416 77885420 H4TF2 TRANSFAC yes 56227723
Genes associated with rs550111662[chr17:77885416], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More