EnhancerDB
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  3. rs550124643[chr2:237630469]
Enhancers that have rs550124643[chr2:237630469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 237618072 237632069 enh34425
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs550124643[chr2:237630469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 237630455 237630476 IRF1 JASPAR yes 82047099
chr2 237630458 237630472 SPIC JASPAR yes 82047101
chr2 237630459 237630474 IRF9 JASPAR yes 82047102
chr2 237630461 237630482 IRF1 JASPAR yes 82047103
chr2 237630466 237630476 HOXA13 JASPAR yes 82047104
chr2 237630466 237630476 HOXB13 JASPAR yes 82047105
chr2 237630466 237630476 HOXD13 JASPAR yes 82047106
chr2 237630466 237630477 HOXA10 JASPAR yes 82047107
chr2 237630467 237630476 CDX1 JASPAR yes 82047108
chr2 237630467 237630478 CDX2 JASPAR yes 82047109
chr2 237630468 237630480 MEF2A JASPAR yes 82047110
chr2 237630468 237630480 MEF2B JASPAR yes 82047111
chr2 237630468 237630480 MEF2D JASPAR yes 82047112
Genes associated with rs550124643[chr2:237630469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More