EnhancerDB
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  3. rs550240270[chr1:46990675]
Enhancers that have rs550240270[chr1:46990675]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46980604 46997155 enh26675
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs550240270[chr1:46990675]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46990656 46990676 PPARG JASPAR yes 28664735
chr1 46990670 46990682 NHLH1 JASPAR yes 28664736
chr1 46990671 46990681 FIGLA JASPAR yes 28664737
chr1 46990671 46990681 TCF3 JASPAR yes 28664738
chr1 46990673 46990678 USF2 TRANSFAC yes 28664739
Genes associated with rs550240270[chr1:46990675], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More