EnhancerDB
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  3. rs550253042[chr1:203723939]
Enhancers that have rs550253042[chr1:203723939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203718083 203727975 enh12565
Skin (Keratinocyte) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus
chr1 203723839 203723956 vista4656
VISTA
Transcript factors that have rs550253042[chr1:203723939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203723568 203724124 POLR2A UCSC Txn Factor no Conserved 107859393
chr1 203723622 203724123 ZNF143 GTRD no Epithelial (MCF-7) 107859394
chr1 203723716 203724086 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107859395
chr1 203723790 203723973 POU2F2 UCSC Txn Factor no Conserved 107859396
chr1 203723790 203723973 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107859397
chr1 203723929 203723940 FLI1 JASPAR yes 34659052
chr1 203723929 203723940 FLI1 JASPAR yes 118436986
chr1 203723930 203723940 GABPA JASPAR yes 34659053
chr1 203723930 203723940 GABPA JASPAR yes 118436987
chr1 203723930 203723943 ELF1 JASPAR yes 34659054
chr1 203723930 203723943 ELF1 JASPAR yes 118436988
Genes associated with rs550253042[chr1:203723939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More