EnhancerDB
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  3. rs550260182[chr17:27367648]
Enhancers that have rs550260182[chr17:27367648]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27357045 27369515 enh69254
Muscle (A673) Neural Stem Cells (H9) Brain (SK-N-MC)
chr17 27367295 27367696 vista24322
VISTA
Transcript factors that have rs550260182[chr17:27367648]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27366126 27367755 ZNF274 GTRD no Bone Marrow (K562) 108246402
chr17 27366181 27368013 ZNF274 GTRD no Bone Marrow (K562) 108246403
chr17 27366889 27367659 ZNF143 GTRD no Epithelial (MCF-7) 108246407
chr17 27367221 27367992 ZNF274 GTRD no Bone Marrow (K562) 108246410
chr17 27367249 27368111 TCF7L2 GTRD no Colon (HCT116) 108246411
chr17 27367269 27367888 ZNF274 GTRD no Bone Marrow (K562) 108246412
chr17 27367401 27367763 ZNF274 GTRD no Bone Marrow (K562) 108246413
chr17 27367415 27367722 ZNF274 GTRD no Bone Marrow (K562) 108246414
chr17 27367473 27368078 ZNF143 GTRD no Epithelial (MCF-7) 108246415
chr17 27367639 27367654 HNF4G JASPAR yes 21214570
chr17 27367639 27367654 HNF4G JASPAR yes 53710537
chr17 27367640 27367654 NR2F1 JASPAR yes 21214571
chr17 27367640 27367654 RXRB JASPAR yes 21214572
chr17 27367640 27367654 RXRG JASPAR yes 21214573
chr17 27367640 27367654 NR2F1 JASPAR yes 53710538
chr17 27367640 27367654 RXRB JASPAR yes 53710539
chr17 27367640 27367654 RXRG JASPAR yes 53710540
chr17 27367640 27367655 HNF4A JASPAR yes 21214574
chr17 27367640 27367655 HNF4A JASPAR yes 53710541
chr17 27367643 27367657 PAX6 JASPAR yes 21214575
chr17 27367643 27367657 PAX6 JASPAR yes 53710542
chr17 27367647 27368030 ZNF143 GTRD no Epithelial (MCF-7) 108246416
Genes associated with rs550260182[chr17:27367648], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More