EnhancerDB
  1. Home
  2. SNP
  3. rs550265854[chr10:28655134]
Enhancers that have rs550265854[chr10:28655134]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 28652705 28673755 enh13080
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs550265854[chr10:28655134]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 28654770 28655150 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21422945
chr10 28654801 28655137 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21422946
chr10 28655127 28655135 E2F1 JASPAR yes 126225991
chr10 28655130 28655135 SP1 TRANSFAC yes 126225992
chr10 28655134 28655138 H4TF2 TRANSFAC yes 126225993
Genes associated with rs550265854[chr10:28655134], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More