EnhancerDB
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  3. rs550295639[chr6:11390423]
Enhancers that have rs550295639[chr6:11390423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11385065 11401475 enh23024
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Liver Astrocyte Lung Stomach Placenta Lung (PC-9) Muscle (Myoblast) Spleen Heart
chr6 11390283 11390548 vista50821
VISTA
Transcript factors that have rs550295639[chr6:11390423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11390115 11390611 TCF7L2 UCSC Txn Factor no Conserved 108538402
chr6 11390138 11390663 GATA3 UCSC Txn Factor no Conserved 108538403
chr6 11390205 11390512 ESR1 UCSC Txn Factor no Conserved 108538404
chr6 11390246 11390562 EP300 UCSC Txn Factor no Conserved 108538405
chr6 11390269 11390475 NR3C1 UCSC Txn Factor no Conserved 108538406
Genes associated with rs550295639[chr6:11390423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More