EnhancerDB
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  3. rs550297050[chr1:165805470]
Enhancers that have rs550297050[chr1:165805470]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 165800587 165834795 enh699
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550297050[chr1:165805470]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 165805466 165805481 FOXP1 JASPAR yes 32801258
chr1 165805466 165805486 RREB1 JASPAR yes 32801259
chr1 165805466 165805487 IRF1 JASPAR yes 32801260
chr1 165805468 165805488 RREB1 JASPAR yes 32801261
chr1 165805470 165805485 STAT2 JASPAR yes 32801262
Genes associated with rs550297050[chr1:165805470], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More